Friday, March 27, 2026

A Real-World Industry-Academia Project Journey

Today the academia industry collaboration has become a pivotal driver of innovation, bridging the gap between theoretical advancements and real-world applications. Universities provide the blue-sky and nurture the talent pool to shape the future, while industry from manufacturing to the creative arts, realizing economic and societal impact of innovation. 

Having said that, I must share the story of our accidental discovery that led to a productive molecule that gained interest for academic research investigations to explore its applications as a bioactive molecule, showing potent anti-microbial activity.

This was two years back when we were working on developing non-infringing route for Gefitinib, the Oncology API. We were developing a six steps scalable chemistry and further filing for IP right. In the second step of nitration on commercially available methyl isovanillate, we observed some abnormal TLC pattern. That triggered us to further characterise this accidental molecule NMR and Mass. Mass data clearly showed this was not mono- but dinitro product. Then next based on NMR data and splitting pattern, we confirmed that the structure of this molecule matched following structure. Later when searched we could see this product already in literature with defined CAS number. Later it further confirmed by comparing the NMR data this accidental product with literature NMR data. Therefore, we came to conclusion that this is dinitro aromatic compound with name Methyl 3-hydroxy-4-methoxy-2,6-dinitrobenzoate (MMDB) with its CAS number: 1261079-62-2.

I have the habit of sharing interesting outcomes/news on social media. So, as soon as the product is confirmed, I shared this on LinkedIn as the “Accidental Product” from our company: SudhiShubha ChemSynthons, Bangalore. The purpose was to bring this accidental discovery to public domain, so that if anybody interested to explore it’s applications, we were open to collaborate.

Interestingly Dr. Gagandeep Singh, Scientist from Microbiology, Central Ayurveda Research Institute, Jhansi, Uttar Pradesh, India expressed his interest to take this product further to explore it’s biological studies. Without a second thought, I simply agreed to collaborate and agreed to supply the material. A thorough investigation was made to study it’s Antimicrobial, redox and developmental toxicity profiles in vitro and in zebrafish. A team of Scientists from other four different colleges (IIT Delhi and affiliated to Delhi University)

[The paper published: The Microbe Volume 10, March 2026, 100694].

The study highlighted in the publication.

  • Remarkable antibacterial activity against both Gram-positive and Gram-negative strains—including multi-drug-resistant (MDR) pathogens—at doses as low as 50 µg/mL.
  • Potent antibacterial action and antifungal activity against C. albicans, P. notatum, and A. niger.
  • Multifaceted Profile: Shows promising antioxidant and anti-inflammatory properties.
  • Safety First: Toxicity profiling in human cell lines (HEK293T, 4T1, MDA-MB-231) and zebrafish models

These findings were very promising positioning MMDB as a strong lead compound for future clinical applications and lead optimization studies. Secondly this publication did not come quickly, it is the result of nine months continuous effort by Dr. Gagandeep Sir to try 3-4 journals and never give-up attitude finally gave this paper. This is great news for whole team, who took part in this endeavour. That is why it is quoted that “Science is a team sport, and everyone played their part in this team effort.

In my perception, this is great effort towards bridging-gap between Academia and Industry to bring our great discovery or product that is impact on real world.

For SudhiShubha ChemSynthons, Bangalore, a research driven startup in chemical science, this is second achievement after we successfully developed non-infringing route for Gefitinib. An Oncology API, which was further taken by JSS College of Pharmacy, Mysore to file Indian patent for this API synthesis. This patent also got published and waiting for this patent to be granted.

When like minded people work together to make difference successful Academia-Industry collaboration can be possible in our country also.

I am thankful to students who worked on this project, the collaborators from Academia and publishing committee for making this dream come true.